structure nameCRYSTAL STRUCTURE OF RIFT VALLEY FEVER VIRUS NUCLEOCAPSID PROTEIN HEXAMER BOUND TO SINGLE-STRANDED DNA
(Nucleocapsid protein)
referenceRaymond et al. Proc.Natl.Acad.Sci.USA 109 19208 2012
sourceRift valley fever virus
experimentX-ray (resolution=2.70, R-factor=0.191)
structural superfamilyUBA-like;
sequence familyPhlebovirus nucleocapsid N protein;
multimeric complexes4h5q_ABC
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYNNSPFIQPA

Estimated binding specificities ?

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# IC=4.434 IC/col=0.887 n_of_columns=5 specificity:   
A |  13   0  16   0   0
C |  16   0  13   0   0
G |  13   0  13   0   0
T |  54  96  54  96  96
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updated Sun Aug 3 08:06:15 2025