interface graph thumbnail
legend  pdf

structure nameGR DNA BINDING DOMAIN - TSLP NGRE COMPLEX
referenceOrtlund et al. Nat.Struct.Mol.Biol. 20 53 2013
sourceHomo sapiens
experimentX-ray (resolution=1.90, R-factor=?)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
reference complex4hn5_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVR/KVR

Estimated binding specificities ?

readout + contactlogo
# IC=4.046 IC/col=0.506 n_of_columns=8 specificity:   
A |   0   9  24   9  24  24   9   0
C |  96  69  24   9  24  24  11  96
G |   0   9  24  69  24  24  67   0
T |   0   9  24   9  24  24   9   0
scan!

home
updated Mon Sep 9 22:15:16 2024