4i2o_AB : 3D-footprint complex

structure name	THE STRUCTURE OF FIXK2 FROM BRADYRHIZOBIUM JAPONICUM
reference	Gruetter et al. J.Biol.Chem. 288 14238 2013
source	Bradyrhizobium japonicum
experiment	X-ray (resolution=1.77, R-factor=?)
structural superfamily	cAMP-binding domain-like;"Winged helix" DNA-binding domain;
reference complex	4i2o_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4i2o_A interface=157,158,159,160,162,163, lvatefsyrkdeeiygedepaeyvyqvvtgavrsykllsdgrrqigafhlpgdvfglesgpshrlaaeaiidtsvrlvkrsslekaagidvqvarklwamtagelrhaedhmlllgrktamervatfllemdrrlavagmmalpmsrrdigdylglTLETvSRalsqlhtqgilgfsgarqivlrnrqrlhnldaaaa > 4i2o_B interface=157,158,159,160,162,163, lvatefsyrkdeeiygedepaeyvyqvvtgavrsykllsdgrrqigafhlpgdvfglesgpshrlaaeaiidtsvrlvkrsslekaagidvqvarklwamtagelrhaedhmlllgrktamervatfllemdrrlavagmmalpmsrrdigdylglTLETvSRalsqlhtqgilgfsgarqivlrnrqrlhnldaaaa
interface signature	TLETSR/TLETSR

Estimated binding specificities ?

readout + contact

# IC=5.807 IC/col=0.484 n_of_columns=12

specificity:

A |  13   0  96  24  24  24  24  24  24   0   0  54
C |  13   0   0  24  24  24  24  24  24   0  96  13
G |  13  96   0  24  24  24  24  24  24   0   0  16
T |  57   0   0  24  24  24  24  24  24  96   0  13

scan!

home
updated Wed Jul 30 01:25:28 2025