4ihs_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF BENM_DBD/CATB SITE 1 DNA COMPLEX
reference	Neidle et al.
source	Acinetobacter sp.
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4iht_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ihs_C interface=19,28,29,30,31,34,53, melrhlryfvavveeqsfTkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh > 4ihs_D interface=19,28,29,30,31,33,34,53, melrhlryfvavveeqsfTkaadklciAQPPlSRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasgh
interface signature	TAQPPRR/TAQPPSRR

Estimated binding specificities ?

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# IC=14.360 IC/col=0.756 n_of_columns=19

specificity:

A |   3  96   9  96   0   0  24  24  24  24  24  13   0   9  66   0   3   9  86
C |   0   0  11   0  96  96  24  24  24  24  24   0   0   0   9   0   3  67   3
G |   0   0  12   0   0   0  24  24  24  24  24   0  96   1   9   0  90   9   4
T |  93   0  64   0   0   0  24  24  24  24  24  83   0  86  12  96   0  11   3

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updated Mon Sep 9 22:18:15 2024