| structure name | CRYSTAL STRUCTURE OF BENM_DBD/BENA SITE 1 DNA COMPLEX (HTH-type transcriptional regulator BenM) |
| reference | Neidle et al. |
| source | Acinetobacter sp. |
| experiment | X-ray (resolution=3.00, R-factor=0.188) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Bacterial regulatory helixturnhelix protei; |
| multimeric complexes | 4ihs_CD 4iht_AB 4iht_CD |
| redundant complexes |  4ihs_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | AQPPRR |
Estimated binding specificities ?
| contact |  |
A | 67 24 24 67 96 9 96 0 0 C | 11 24 24 9 0 9 0 96 0 G | 9 24 24 11 0 9 0 0 0 T | 9 24 24 9 0 69 0 0 96scan! |
Dendrogram of similar interfaces ?
matrix format--SG--PTPG--TT--------------------HG-- L +---------------------------7d98_Q ! --STQTPTPG--TTRG------------------HT-- L ! +-----5xxp_A ! +------------4 --ST--PTTC----STQC------RA------------ L ! ! +-----1ddn_B ! +---7 NGLTKTPTST--TT----------RT------------ L ! ! ! +7el3_B ! ! +------------------1 ET--RGTCTG--STRG---------------------- L ! ! +6q2b_B -13 +--10 LTNTHG--RT--YTPT---------------------- L ! ! ! +---------------6qil_A ! ! ! +---6 --TC--KTTC--KGTCHT--ST---------------- L ! ! ! ! +---------------7ve5_B ! +-11 +--8 ----------------RC----YG--------KT---- ! ! ! ! +---2acj_B ! ! ! +---------------3 ----------QTNAST--RGHTNT--STLA-------- L ! ! ! +---2hdc_A ! ! ! LTNTHGTA----YTRG---------------------- +-12 +--------------------------2efw_A ! ----------------------YGRG------------ ! +4wcg_A ! +-------------2 YA--KTPTPG----YTRG-------------------- L ! +----5 +4mtd_D ! ! ! --STRGQTQA--ST----------------HG----KT L +------9 +--------------7t8k_B ! --ST--EC--TT--RAKA-------------------- +-------------------7oz3_B |
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updated Fri Sep 13 18:22:17 2024