4iht_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF BENM_DBD/BENA SITE 1 DNA COMPLEX
reference	Neidle et al.
source	Acinetobacter sp.
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4iht_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4iht_A interface=28,29,30,31,53, melrhlryfvavveeqsftkaadklciAQPPlsrqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasgh > 4iht_B interface=28,29,30,31,34,53, melrhlryfvavveeqsftkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh
interface signature	AQPPR/AQPPRR

Estimated binding specificities ?

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# IC=10.238 IC/col=0.602 n_of_columns=17

specificity:

A |  90  92  14  81   0   2  24  24  24  24  24  24  10   2  77   0   4
C |   4   2  21   2  96   4  24  24  24  24  24  24   8   2   4   0   2
G |   0   2   5  13   0   0  24  24  24  24  24  24  68   4  10   0   2
T |   2   0  56   0   0  90  24  24  24  24  24  24  10  88   5  96  88

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updated Mon Sep 9 22:18:30 2024