4iht_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF BENM_DBD/BENA SITE 1 DNA COMPLEX
reference	Neidle et al.
source	Acinetobacter sp.
experiment	X-ray (resolution=3.00, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4iht_D
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4iht_C interface=28,29,30,31,33,53, melrhlryfvavveeqsftkaadklciAQPPlSrqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkria > 4iht_D interface=28,29,30,31,34,53, melrhlryfvavveeqsftkaadklciAQPPlsRqiqnleeelgiqllergsRpvkttpeghffyqyaikllsnvdqmvsmtkriasghh
interface signature	AQPPSR/AQPPRR

Estimated binding specificities ?

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# IC=9.463 IC/col=0.591 n_of_columns=16

specificity:

A |  96  17  87  12  24  24  24  24  24  24  92   0   3  73   0   3
C |   0   3   3  57  24  24  24  24  24  24   1   0   4   4   0   3
G |   0   3   3  16  24  24  24  24  24  24   3  96   3   3   0   4
T |   0  73   3  11  24  24  24  24  24  24   0   0  86  16  96  86

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updated Mon Sep 9 22:18:47 2024