4ihv_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP SEQUENCE DNA F28 (AAATTTGTTTGAGCGTTGAGCAAATTT)
reference	Hancock et al. 'Nucleic 41 6750 2013
source	Escherichia coli
experiment	X-ray (resolution=2.72, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ihv_A interface=68,77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn > 4ihv_B interface=75,84,85,87,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn
interface signature	TNRTR/TNRTR

Estimated binding specificities ?

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# IC=8.041 IC/col=0.473 n_of_columns=17

specificity:

A |   4   0  17  24   1   4  24  24  24  24  24   1  17  24  24   0  87
C |   6   0  10  24  17   8  24  24  24  24  24   0   0  24  24  96   0
G |   4  96  13  24   0  78  24  24  24  24  24   4  74  24  24   0   4
T |  82   0  56  24  78   6  24  24  24  24  24  91   5  24  24   0   5

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updated Wed Jul 30 01:28:26 2025