4ihy_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27BP INOSINE SUBSTITUTED DNA F29-DI (AAATTTGTTTGIICICTGAGCAAATTT)
reference	Hancock et al. 'Nucleic 41 6750 2013
source	Escherichia coli
experiment	X-ray (resolution=2.90, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ihy_A interface=68,77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn > 4ihy_B interface=75,84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn
interface signature	TNRTR/TNRR

Estimated binding specificities ?

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# IC=8.642 IC/col=0.508 n_of_columns=17

specificity:

A |   6   0   7  24  17   1  24  24  24  24  24   1  49  24  13   0  96
C |   1   0  21  24  19   0  24  24  24  24  24   6   3  24   5  96   0
G |   1  96  11  24   9  94  24  24  24  24  24   3  38  24  73   0   0
T |  88   0  57  24  51   1  24  24  24  24  24  86   6  24   5   0   0

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updated Fri Dec 13 19:59:09 2024