4is1_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF ZNF217 BOUND TO DNA
reference	Vandevenne et al. J.Biol.Chem. 288 10616 2013
source	Homo sapiens
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	beta-beta-alpha zinc fingers;
reference complex	3uk3_C
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4is1_C interface=11,12,14,15,40,42,43,45,46, recsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhh > 4is1_D interface=12,13,15,16,41,43,44,46,47, srecsycgkffRSnYYlnihlrthtgekpykcefceyaaaQkTSlRYhlerhhk
interface signature	RSYYQTSRY/RSYYQTSRY

Estimated binding specificities ?

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# IC=16.804 IC/col=0.934 n_of_columns=18

specificity:

A |   9   3   0  96   0  96  86   4  24  24  81   1   0   0   3   0  33  83
C |   4   0  96   0   0   0   4   2  24  24   4   7   0  96   0   0  60   7
G |   2  60   0   0  96   0   2   7  24  24   7   2   0   0   0  96   1   4
T |  81  33   0   0   0   0   4  83  24  24   4  86  96   0  93   0   2   2

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updated Mon Sep 9 22:20:26 2024