4l0y_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF RUNX1 AND ETS1 BOUND TO TCR ALPHA PROMOTER (CRYSTAL FORM 1)
reference	Leukemia 28 2040 2014
source	MUS MUSCULUS / HOMO SAPIENS
experiment	X-ray (resolution=2.50, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4l0y_A interface=31,93,121,122,125,128, smvevladhpgelvrtdspnflcsvlpthwRcnktlpiafkvvalgdvpdgtlvtvmagndenysaelrnataamknqvarfndlrfvgrsgRgksftltitvftnppqvatyhraikitVDgpRepR > 4l0y_B interface=55,58,61,62, piqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeKlsRglRYyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkp
interface signature	RRVDRR/KRRY

Estimated binding specificities ?

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# IC=12.323 IC/col=1.027 n_of_columns=12

specificity:

A |  85   0   0  96   5   0   5   0   0   5   5   5
C |   6   0   0   0   1   0   5   0   0  61   6  11
G |   5  96  96   0   0  96  10  96  96   5  10   5
T |   0   0   0   0  90   0  76   0   0  25  75  75

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updated Fri Dec 13 20:34:24 2024