4lll_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_A interface=59,61,62,64,65,86, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_B interface=59,61,62,64,65,86, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSNR

Estimated binding specificities ?

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# IC=12.052 IC/col=0.634 n_of_columns=19

specificity:

A |   2   2  24  24  24   2  96  11  93  24  24   0   2   0  87  78  24  24  87
C |   2   1  24  24  24   0   0   2   0  24  24   0  66   0   2   2  24  24   2
G |   5   0  24  24  24   4   0  66   2  24  24   0  17   0   2  14  24  24   2
T |  87  93  24  24  24  90   0  17   1  24  24  96  11  96   5   2  24  24   5

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updated Mon Jan 5 10:20:41 2026