4lll_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_C interface=59,61,62,64,65,86, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_D interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSNR

Estimated binding specificities ?

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# IC=10.775 IC/col=0.567 n_of_columns=19

specificity:

A |   5  24  24   4   5  96  24  24  24  24   0   2   0  87  62  24  24  96  90
C |   2  24  24  14   2   0  24  24  24  24   2  76   0   2   8  24  24   0   2
G |   2  24  24   2   2   0  24  24  24  24   4  16   0   2  11  24  24   0   2
T |  87  24  24  76  87   0  24  24  24  24  90   2  96   5  15  24  24   0   2

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updated Wed Jun 24 21:58:32 2026