4lll_IJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_I interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_J interface=59,61,62,64,65, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSN

Estimated binding specificities ?

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# IC=12.169 IC/col=0.761 n_of_columns=16

specificity:

A |   3   0  24  24   3   0  96   4  82  24  24   9   3   0  96  86
C |   3   0  24  24  13   0   0   3   8  24  24  16  86   0   0   3
G |   4   0  24  24   4   0   0  86   3  24  24   9   4   0   0   3
T |  86  96  24  24  76  96   0   3   3  24  24  62   3  96   0   4

scan!

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updated Mon Sep 9 22:59:50 2024