4lll_IJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_I interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_J interface=59,61,62,64,65, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSN

Estimated binding specificities ?

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# IC=12.550 IC/col=0.784 n_of_columns=16

specificity:

A |   0   0  24  24   0   0  96   0  64  24  24  24   0   0  96  84
C |   0   0  24  24  16   0   0   0  16  24  24  20  92   0   0   4
G |   4   0  24  24   0   0   0  96   4  24  24  16   0   0   0   4
T |  92  96  24  24  80  96   0   0  12  24  24  36   4  96   0   4

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updated Wed Jun 24 21:59:09 2026