4lll_IJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_I interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_J interface=59,61,62,64,65, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSN

Estimated binding specificities ?

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# IC=12.467 IC/col=0.779 n_of_columns=16

specificity:

A |   0   0  24  24   4   0  96   0  87  24  24  13   4   0  96  78
C |   4   0  24  24  10   0   0   5   4  24  24  17  91   0   0   0
G |   5   0  24  24   4   0   0  87   1  24  24  14   1   0   0   0
T |  87  96  24  24  78  96   0   4   4  24  24  52   0  96   0  18

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updated Mon Jan 5 10:21:03 2026