4lll_IJ : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=3.04, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lll_I interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lll_J interface=59,61,62,64,65, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtrrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSN

Estimated binding specificities ?

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# IC=12.130 IC/col=0.758 n_of_columns=16

specificity:

A |   3   0  96   3  60  24  24  14   3   0  96  80  24  24  96  86
C |   3   0   0   3  12  24  24   3  86   0   0   3  24  24   0   3
G |   3   0   0  86   9  24  24   3   4   0   0  10  24  24   0   4
T |  87  96   0   4  15  24  24  76   3  96   0   3  24  24   0   3

scan!

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updated Wed Jul 30 02:12:12 2025