4lln_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=2.84, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	4lln_I
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lln_A interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lln_B interface=59,61,62,64,65,86, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSNR

Estimated binding specificities ?

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# IC=15.488 IC/col=0.738 n_of_columns=21

specificity:

A |   2   0  24  24   2   0  96   5  92  24  24   4  10   0  90  90  24  24  90  93  77
C |   2   0  24  24   2   4   0  11   2  24  24   2  72   0   4   2  24  24   4   1   5
G |   2   0  24  24   2   2   0  70   2  24  24   2   5   0   0   2  24  24   2   0  12
T |  90  96  24  24  90  90   0  10   0  24  24  88   9  96   2   2  24  24   0   2   2

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updated Mon Jan 5 10:21:37 2026