4lln_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF S. AUREUS MEPR-DNA COMPLEX
reference	Brennan et al. 'Nucleic 42 2774 2014
source	STAPHYLOCOCCUS AUREUS
experiment	X-ray (resolution=2.84, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4lln_A interface=58,60,61,63,64,85, ftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq > 4lln_B interface=59,61,62,64,65,86, eftysylfrmishemkqkadqkleqfditneqghtlgylyahqqdgltqndiakalqrTgPTvSNllrnlerkkliyryvdaqdtRrkniglttsgiklveaftsifdemeqtlvsqlseeeneqmkanltkmlsslq
interface signature	TPTSNR/TPTSNR

Estimated binding specificities ?

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# IC=15.343 IC/col=0.731 n_of_columns=21

specificity:

A |   8   8   0  24  24   0   0  96   8  90  24  24   3   8   0  93  93  24  24  96  90
C |  10   6   3  24  24   0   2   0   6   2  24  24   2  70   0   3   1  24  24   0   2
G |   8   6   2  24  24   0   0   0  70   2  24  24   2  10   0   0   2  24  24   0   2
T |  70  76  91  24  24  96  94   0  12   2  24  24  89   8  96   0   0  24  24   0   2

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updated Fri Dec 13 20:43:03 2024