interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE RSTA DNA-BINDING DOMAIN IN COMPLEX WITH RSTA BOX
referenceHsiao et al. 'Nucleic 42 8777 2014
sourceKlebsiella pneumoniae
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
reference complex4nhj_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRDVSRR/RSDVRR

Estimated binding specificities ?

readout + contactlogo
# IC=14.311 IC/col=0.894 n_of_columns=16 specificity:   
A |   3   0  12  90   0  96  24  24   3   0   0   0   8  55   0   0
C |   7   0  12   0  96   0  24  24  84  96   0   0  18   3  96   0
G |   6  96  17   6   0   0  24  24   3   0  96   0  15  34   0   0
T |  80   0  55   0   0   0  24  24   6   0   0  96  55   4   0  96
scan!

home
updated Wed Jun 24 22:05:21 2026