4nhj_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE RSTA DNA-BINDING DOMAIN IN COMPLEX WITH RSTA BOX
reference	Hsiao et al. 'Nucleic 42 8777 2014
source	Klebsiella pneumoniae
experiment	X-ray (resolution=2.70, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4nhj_A interface=66,69,70,73,74,93, phktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRsvDVaiSRlrkklldnatepyriktvRnkgylfaph > 4nhj_B interface=65,66,68,69,73,92, hktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRSvDVaisRlrkklldnatepyriktvRnkgylfaph
interface signature	RDVSRR/RSDVRR

Estimated binding specificities ?

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# IC=13.678 IC/col=0.855 n_of_columns=16

specificity:

A |   9   0   9  82   0  96  24  24   9   0   0   0  24  64   0   0
C |   4   0   4   6  96   0  24  24  68  96   0   0  24   4  96   0
G |   4  96  13   4   0   0  24  24   4   0  96   0  24  24   0   0
T |  79   0  70   4   0   0  24  24  15   0   0  96  24   4   0  96

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updated Fri Dec 13 20:48:05 2024