4nhj_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE RSTA DNA-BINDING DOMAIN IN COMPLEX WITH RSTA BOX
reference	Hsiao et al. 'Nucleic 42 8777 2014
source	Klebsiella pneumoniae
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	4nhj_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4nhj_A interface=66,69,70,73,74,93, phktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRsvDVaiSRlrkklldnatepyriktvRnkgylfaph > 4nhj_B interface=65,66,68,69,73,92, hktisfgsltidpvnrqvmlggenvalstadfdmlwelathagqimdrdallknlrgvtydgmdRSvDVaisRlrkklldnatepyriktvRnkgylfaph
interface signature	RDVSRR/RSDVRR

Estimated binding specificities ?

readout + contact

# IC=13.231 IC/col=0.827 n_of_columns=16

specificity:

A |  96   0   5  24  96   0   0  11  24  24   0   0   3  62   0  73
C |   0   0  25  24   0  96   0  15  24  24   0   0   6  24  96   9
G |   0  96   7  24   0   0  96  59  24  24   0  96   3   7   0   3
T |   0   0  59  24   0   0   0  11  24  24  96   0  84   3   0  11

scan!

home
updated Mon Sep 9 23:05:01 2024