Estimated binding specificities ?

structure nameDISTINCT STRUCTURAL FEATURES OF TFAM DRIVE MITOCHONDRIAL DNA PACKAGING VERSUS TRANSCRIPTIONAL ACTIVATION
referenceLovely et al. 'Nat 5 3077 2014
experimentX-ray (resolution=2.90, R-factor=0.223)
structural superfamilyHMG-box;
sequence familyHMG high mobility group box;
multimeric complexes4nnu_AB 4nod_ABGH
reference complex4nnu_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
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# IC=7.965 IC/col=0.531 n_of_columns=15 specificity:   
A |  96   0  11  96  24  24  24  24  24  24  24  11  96   0   9
C |   0  96  67   0  24  24  24  24  24  24  24   9   0  96  67
G |   0   0   9   0  24  24  24  24  24  24  24   9   0   0   9
T |   0   0   9   0  24  24  24  24  24  24  24  67   0   0  11
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updated Mon Dec 18 11:01:34 2023