4noe_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF DDRB BOUND TO 30B SSDNA (Single-stranded DNA-binding protein DdrB)
reference	Sugiman-Marangos et al. Proc.Natl.Acad.Sci.USA 113 4308 2016
source	Deinococcus radiodurans
experiment	X-ray (resolution=2.20, R-factor=0.192)
multimeric complexes	4noe_ABCDE
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4noe_A interface=81,83,91,93,94,96,98,100,113,115,119,121,128, mlqiefitdlgarvtvnvehesrlldvqrhygrlgwtsgeipsggyqfpieneadfdwsligarkwkeelvihrghayrrReLeavdsrkLkLPaAiKySrgakvsdpqhvrEkAdgdIeYvslaifRggkrqeryavp
interface signature	RLLLPAKSEAIYR

Estimated binding specificities ?

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# IC=4.007 IC/col=0.134 n_of_columns=30

specificity:

A |   0   0  11  11  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   9
C |   0   0   9  67  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  69
G |   0   0  67   9  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   9
T |  96  96   9   9  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   9

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updated Fri Sep 13 18:33:29 2024