interface graph thumbnail
legend  pdf

structure nameMVNEI1-G86D
(formamidopyrimidine-DNA glycosylase)
referencePrakash et al. 'Dna 14 17 2014
sourceAcanthamoeba polyphaga mimivirus
experimentX-ray (resolution=2.85, R-factor=0.265)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2;
reference complex3vk8_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLMRFSKNR

Estimated binding specificities ?

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# IC=6.185 IC/col=0.884 n_of_columns=7 specificity:   
A |  96  24   0  19   0   0  76
C |   0  24   0  20  96   0   0
G |   0  24  96  19   0   0  19
T |   0  24   0  38   0  96   1
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updated Sat Aug 2 07:02:19 2025