4ond_AB : 3D-footprint complex

structure name	ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - ERE DNA COMPLEX
reference	Ortlund et al. 'Cell(Cambridge,Mass.)' 159 58 2014
source	synthetic construct
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	4ond_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ond_A interface=22,25,26,30, qkvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg > 4ond_B interface=21,24,25,29, kvclicgdeasgchygvltcEgcKAffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg
interface signature	EKAR/EKAR

Estimated binding specificities ?

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# IC=8.420 IC/col=0.648 n_of_columns=13

specificity:

A |   0   0  11  24  90  24  24  24   5   0  70   0  73
C |   0   0   7  24   0  24  24  24  13   0  16  96  16
G |  96  96  16  24   0  24  24  24  11  96   5   0   2
T |   0   0  62  24   6  24  24  24  67   0   5   0   5

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updated Mon Jan 5 10:41:00 2026