4osi_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TAL EFFECTOR DHAX3 WITH NI RVD AT 2.8 ANGSTROM RESOLUTION (HAX3)
reference	Yan et al. 'Protein 5 297 2014
source	XANTHOMONAS CAMPESTRIS PV. ARMORACIAE
experiment	X-ray (resolution=2.85, R-factor=0.245)
structural superfamily	Thiolase-like;
sequence family	Xanthomonas avirulence protein, Avr/PthA;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4osi_A interface=31,66,100,134,270,338,406, ralealltvagelrgpplqldtgqllkiakRggvtaveavhawrnaltgaplnltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasnIggkqaletvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashDggkqaletvqrllpvlcqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashDggkqaletvqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggrpaldavkk
interface signature	RDDDIDD

Estimated binding specificities ?

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# IC=7.949 IC/col=0.723 n_of_columns=11

specificity:

A |   0   0   0  65  24   0  61  24   8  13   0
C |  96  96  96  14  24   0  14  24  61  17  96
G |   0   0   0  13  24   0   8  24  13  14   0
T |   0   0   0   4  24  96  13  24  14  52   0

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updated Tue Dec 17 00:06:58 2024