4ov7_AB : 3D-footprint complex

structure name	ANCESTRAL STEROID RECEPTOR 2 DBD HELIX MUTANT - SRE DNA COMPLEX
reference	'Cell(Cambridge,Mass.)' 159 58 2014 X-RAY DIFFRACTION
source	synthetic construct
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	5cbz_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4ov7_A interface=26,27,31, pqkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg > 4ov7_B interface=24,25,29, kvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtl
interface signature	KVR/KVR

Estimated binding specificities ?

readout + contact

# IC=6.495 IC/col=0.500 n_of_columns=13

specificity:

A |   1  24  48   0  96  24  24  24   0   0  24  24  69
C |   0  24  28  96   0  24  24  24   0   0  24  24   9
G |  76  24  11   0   0  24  24  24  10  96  24  24   9
T |  19  24   9   0   0  24  24  24  86   0  24  24   9

scan!

home
updated Mon Sep 9 23:18:22 2024