interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF A COMPLEX BETWEEN A C248GH LLFPG MUTANT AND A THF CONTAINING DNA
(Formamidopyrimidine-DNA glycosylase)
referenceCastaing et al. 'Nucleic 42 10748 2014
sourceLactococcus lactis subsp. cremoris
experimentX-ray (resolution=1.65, R-factor=0.154)
structural superfamilyN-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain;
sequence familyFormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  QALGYA----------RG                           +---1k3x_A    
                                         +-----1 
  --LG--MTRCFC--NGRT   L   +-------------2     +---3vk8_B    
                           !             ! 
  --MG--ITRCFG------   L --3             +---------5itu_A    
                           ! 
  ------------RT----       +-----------------------6bek_D    
                         

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updated Fri Sep 13 18:37:16 2024