| structure name | CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE LACTOCOCCUS LACTIS FPG MUTANT T221P AND A FAPY-DG CONTAINING DNA (Formamidopyrimidine-DNA glycosylase) |
| reference | Castaing et al. 'To ? ? ? |
| source | Lactococcus lactis subsp. cremoris |
| experiment | X-ray (resolution=1.60, R-factor=0.164) |
| structural superfamily | N-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | FormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS; |
| multimeric complexes | 4cis_AB |
| redundant complexes | 1kfv_B
 1nnj_A
1pji_A
1pjj_A
1pm5_A
1tdz_A
1xc8_A
2xzf_A
2xzu_A
3c58_A
4cis_A
4pcz_A
4pdg_A
4pdi_A
6h0s_A
6rnm_A
6rno_A
6ro2_A
6rok_A
6rp7_A
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--RTMT--RCFA------RT +---6fl1_A ! --RGMG--RCFC------RG L +-------------3 +3u6p_A ! ! +-1 --RA----RGFT------RA ! +-2 +3gpu_A ! ! RT--MG--RCFC------RT L +----------7 +-6tc9_A ! ! ----MG--RGFG------RG ! ! +----3twm_A ! ! +------4 ----LGMTRCFC--KANGRT L ! ! ! +----3vk8_B --8 +-----6 ----MGITRCFG----HGRG L ! ! +------5itu_A ! +----5 ----MGITRCFG------RG ! +------6lwd_G ! ------------RT------ +----------------------------6bek_D |
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updated Fri Sep 13 21:40:01 2024