interface graph thumbnail
legend  pdf

structure nameCOMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES
referenceMayo et al. Nature 525 230 2015
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=3.20, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex4qtr_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIN/IN

Estimated binding specificities ?

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# IC=3.101 IC/col=0.345 n_of_columns=9 specificity:   
A |  54  96  24  24  24  24  24   0  16
C |  13   0  24  24  24  24  24   0  13
G |  13   0  24  24  24  24  24   0  13
T |  16   0  24  24  24  24  24  96  54
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updated Wed Jul 30 02:48:10 2025