4qtr_CD : 3D-footprint complex

structure name	COMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES
reference	Mayo et al. Nature 525 230 2015
source	DROSOPHILA MELANOGASTER
experiment	X-ray (resolution=3.20, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4qtr_C interface=43,47, rtafseeqkkaldlafyfdryltpewrrylsqrlglneaqikIwfqNkrakikkstg > 4qtr_D interface=43,47, rtafseeqkkaldlafyfdryltpewrrylsqrlglneaqikIwfqNkrakikks
interface signature	IN/IN

Estimated binding specificities ?

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# IC=3.101 IC/col=0.345 n_of_columns=9

specificity:

A |  54  96  24  24  24  24  24   0  16
C |  13   0  24  24  24  24  24   0  13
G |  16   0  24  24  24  24  24   0  13
T |  13   0  24  24  24  24  24  96  54

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updated Fri Dec 13 21:18:55 2024