| structure name | COMPUTATIONAL DESIGN OF CO-ASSEMBLING PROTEIN-DNA NANOWIRES (DUALENH) |
| reference | Mayo et al. Nature 525 230 2015 |
| source | DROSOPHILA MELANOGASTER |
| experiment | X-ray (resolution=3.20, R-factor=0.270) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 4qtr_AB 4qtr_CD |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format----------------IAKGNA------ L +-------------6m3d_C +---------4 ----------------NT--NAITRG-- ! +-------------5zjt_B ! ----------------VAQTNA------ L ! +5hod_A ! +--------1 ----------------IAQCNAYA--RT L ! ! +1nk2_P +-9 +------3 ----------------ITQCNAACRG-- L ! ! ! ! +6a8r_A ! ! +--5 +-------2 --RT------------NCSTNARG---- L ! ! ! ! +1mnm_C ! ! +--7 ! --------------RCVTCTNAQTRC-- L ! ! ! ! +---------------1au7_A +--10 ! ! ! --------------RCVACTNAQA---- L ! ! +-8 +------------------7xrc_C ! ! ! NGRGTG--LGLC---------------- ! ! ! +-----------------6vjw_A +-11 ! +---6 --------------RTVAITNAMCRG-- L ! ! ! +-----------------1yrn_A ! ! ! NGRGTG--LGLCRG-------------- +-12 ! +-------------------------7kz0_A ! ! ! ----------------NT--NAIARG-- L ! ! +-----------------------------1b72_B -13 ! ----------------YAQTNAAARG-- L ! +-----------------------------6wig_A ! ------NT-------------------- +-----------------------------7tve_F |
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updated Fri Sep 13 18:41:05 2024