4r2p_A : 3D-footprint complex

structure name	WILMS TUMOR PROTEIN (WT1) ZINC FINGERS IN COMPLEX WITH HYDROXYMETHYLATED DNA (Wilms tumor protein, isoform 4CRA_a)
reference	Olanrewaju et al. 'Genes 28 2304 2014
source	Homo sapiens
experiment	X-ray (resolution=1.79, R-factor=0.180)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5kl3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4r2p_A interface=18,20,21,24,46,47,48,49,52,76,77,78,79,82, sekpyqcdfkdcerrfsRsDQlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRSDElvRhhnmhqr
interface signature	RDQRRSDHTRSDER

Estimated binding specificities ?

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# IC=9.764 IC/col=1.085 n_of_columns=9

specificity:

A |  13   0   0   0   0   0   0   0  13
C |  13  96   0   0   0   0   0   0  16
G |  54   0  96   0  96  96  96  96  13
T |  16   0   0  96   0   0   0   0  54

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updated Thu Sep 12 20:01:53 2024