structure name | WILMS TUMOR PROTEIN (WT1) ZNF2-4 Q369H IN COMPLEX WITH DNA (Wilms tumor protein) |
reference | Hashimoto et al. 'Nucleic 44 10165 2016 |
source | Homo sapiens |
experiment | X-ray (resolution=1.45, R-factor=0.163) |
structural superfamily | beta-beta-alpha zinc fingers; |
sequence family | Zinc finger, C2H2 type; |
redundant complexes | 4r2e_A 4r2p_A 4r2q_A 4r2r_A 4r2s_A 5kl2_A 5kl4_D 5kl5_A 5kl6_A 5kl7_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RDHRRSDHTRDER |
Estimated binding specificities ?
readout + contact |
A | 0 0 0 1 14 0 0 83 0 13 C | 0 96 0 13 0 0 0 0 0 13 G | 96 0 96 0 82 96 96 13 96 54 T | 0 0 0 82 0 0 0 0 0 16scan! |
Dendrogram of similar interfaces ?
matrix format--KG--WTKA--------HCHGRG--TAACNA--KGRG L +1tf6_A +-----------1 NGKT--WTKG--------HTHGRGTGTTACNA--KGRG L +---------------3 +1tf3_A ! ! ------------RGST--YGYC----QCTGSTRGYT-- ! +-----------4is1_C ! --CT--STQTLTITST--STHTRG--RG--EA--RA-- L ! +-------------------5v3j_F ! ! --VT----NARG------ETTG----YGST-------- --8 +----5 +--6e94_A ! ! ! +------------2 --DG--YCKGRG--QA----TC----RASCDC--VT-- L ! ! +---4 +--5k5h_A ! +-6 ! --------------QA----TCRG--RGYCRT------ L ! ! ! +---------------7txc_E +-7 ! --NT--STNAVT--QTSTSGKGRG-------------- L ! +------------------------6u9q_A ! QT--AG--KGRG--RG--DCKG---------------- L +-------------------------7n5w_A |
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updated Fri Sep 13 19:59:11 2024