4r2r_A : 3D-footprint complex

structure name	WILMS TUMOR PROTEIN (WT1) ZINC FINGERS IN COMPLEX WITH CARBOXYLATED DNA (Wilms tumor protein, isoform 4CRA_a)
reference	Olanrewaju et al. 'Genes 28 2304 2014
source	Homo sapiens
experiment	X-ray (resolution=2.09, R-factor=0.195)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	5kl3_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4r2r_A interface=18,20,24,46,47,48,49,52,76,78,79,82, sekpyqcdfkdcerrfsRsDqlkRhqrrhtgvkpfqcktcqrkfsRSDHlkThtrthtgekpfscrwpscqkkfaRsDElvRhhnmhq
interface signature	RDRRSDHTRDER

Estimated binding specificities ?

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# IC=9.337 IC/col=1.037 n_of_columns=9

specificity:

A |   9   0   9   0   0   0   0   0   9
C |   9  96   9   0   0   0   0   0   9
G |  67   0  67   0  96  96  96  96   9
T |  11   0  11  96   0   0   0   0  69

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updated Thu Sep 12 20:01:58 2024