4wu4_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA
reference	Davlieva et al. 'Nucleic 43 4758 2015
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	4wuh_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wu4_A interface=36,39,43, mvlhedltnreheilmliaqgksnqeiadelfitlKtvKthvSnilakldvdnrtqaaiyafqhglak > 4wu4_B interface=34,36,37,39,40,41,44, mvlhedltnreheilmliaqgksnqeiadelfiTlKTvKTHvsNilakldvdnrtqaaiyafqhglak
interface signature	KKS/TKTKTHN

Estimated binding specificities ?

readout + contact

# IC=7.847 IC/col=0.561 n_of_columns=14

specificity:

A |   0  24  24   3  27  24  24  24   0  24  54   0   6  96
C |   0  10  24  75  13  24  24  24   0  24   3  96   0   0
G |  96  52  24   8  15  24  24  24  96  24  37   0  89   0
T |   0  10  24  10  41  24  24  24   0  24   2   0   1   0

scan!

home
updated Wed Jul 30 03:03:56 2025