4wu4_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 22BP DNA
reference	Davlieva et al. 'Nucleic 43 4758 2015
experiment	X-ray (resolution=2.30, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wu4_A interface=36,39,43, mvlhedltnreheilmliaqgksnqeiadelfitlKtvKthvSnilakldvdnrtqaaiyafqhglak > 4wu4_B interface=34,36,37,39,40,41,44, mvlhedltnreheilmliaqgksnqeiadelfiTlKTvKTHvsNilakldvdnrtqaaiyafqhglak
interface signature	KKS/TKTKTHN

Estimated binding specificities ?

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# IC=7.903 IC/col=0.565 n_of_columns=14

specificity:

A |   0   1   0   6  24   0  24  24  24  61   5  24  10   0
C |   0  85   0  15  24  96  24  24  24  15  15  24  60  96
G |   0   0  96   5  24   0  24  24  24  10  66  24  11   0
T |  96  10   0  70  24   0  24  24  24  10  10  24  15   0

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updated Fri Dec 13 21:35:40 2024