4wul_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA
reference	Davlieva et al. 'Nucleic 43 4758 2015
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	4wuh_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wul_A interface=34,35,37,38,39,41,42, lhedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla > 4wul_B interface=33,34,36,37,38,40,41, hedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla
interface signature	KTKTHSN/KTKTHSN

Estimated binding specificities ?

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# IC=9.638 IC/col=0.602 n_of_columns=16

specificity:

A |   0   0  82   0  24  82   4  24  24  24  24  24  82  13   4  96
C |   0  96   4   0  24   4   4  24  24  24  24  24   4  69   4   0
G |   0   0   6   0  24   6  74  24  24  24  24  24   4  10   6   0
T |  96   0   4  96  24   4  14  24  24  24  24  24   6   4  82   0

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updated Mon Sep 9 23:56:13 2024