4wul_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF E. FAECALIS DNA BINDING DOMAIN LIARD191N COMPLEXED WITH 26BP DNA
reference	Davlieva et al. 'Nucleic 43 4758 2015
experiment	X-ray (resolution=2.40, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wul_A interface=34,35,37,38,39,41,42, lhedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla > 4wul_B interface=33,34,36,37,38,40,41, hedltnreheilmliaqgksnqeiadelfitlKTvKTHvSNilakldvdnrtqaaiyafqhgla
interface signature	KTKTHSN/KTKTHSN

Estimated binding specificities ?

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# IC=9.610 IC/col=0.601 n_of_columns=16

specificity:

A |   0   0  82   4  24  91   8  24  24  24  24  24  84   4   4  96
C |   0  96   4   4  24   0  13  24  24  24  24  24   4  74   4   0
G |   0   0   6   6  24   5  67  24  24  24  24  24   4   4   1   0
T |  96   0   4  82  24   0   8  24  24  24  24  24   4  14  87   0

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updated Fri Dec 13 21:43:44 2024