| structure name | CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP AND NC2 BOUND TO A PROMOTER DNA FRAGMENT (TATA-BINDING PROTEIN-ASSOCIATED PHOSPHOPROTEIN) | |
| reference | Hopfner et al. Elife 4 ? 2015 | |
| source | ENCEPHALITOZOON CUNICULI | |
| experiment | X-ray (resolution=3.78, R-factor=0.236) | |
| structural superfamily | Histone-fold; | |
| sequence family | Histonelike transcription factor CBF/; | |
| multimeric complexes | 4wzs_ABD | |
| links to other resources | NAKB  PDIdb DNAproDB | |
| site | source | matches (E-value) |
|---|---|---|
| term: TBP | ||
| TATAAAAG | PubMed | 4wzs_ABD(1.10e-13) |
| TATAAA | PubMed | 4wzs_ABD(1.19e-08) |
| TGTAAA | PubMed | 4wzs_ABD(3.30e-04) |
| GGGTATAAAAGG | PubMed | 4wzs_ABD(3.37e-10) |
| TATAA | PubMed | 4wzs_ABD(3.62e-06) |
| CTTTT | PubMed | 4wzs_ABD(3.63e-06) |
| AATAAAAG | PubMed | 4wzs_ABD(2.06e-09) |
| TATATA | PubMed | 4wzs_ABD(3.30e-04) |
| CATAAA | PubMed | 4wzs_ABD(3.91e-05) |
| TATTTAAA | PubMed | 4wzs_ABD(6.57e-03) |
| TAAAAA | PubMed | 4wzs_ABD(3.91e-05) |
| TATATAA | PubMed | 4wzs_ABD(6.03e-06) |
| site | source | matches (E-value) |
Dendrogram of similar interfaces ?
matrix format----RA---- +-----------------------------6g0l_D ! --RC------ ! +7xyf_B ! +-3 ------KG-- ! ! +7nkx_f ! +---------5 --RA------ ! ! ! +1zla_C --9 ! +-2 --RG------ ! +---6 +8ox0_C ! ! ! --RT------ ! ! ! +7kbd_C ! +------7 +-----------1 --RG------ ! ! ! +5x0y_G ! ! ! KT-------- L +------8 ! +-7cvo_A ! +-------------4 --RG------ ! +-8jla_C ! --RA----RA +----------------------6a5l_g |
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updated Sun Aug 3 08:35:09 2025