4wzs_ABD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE MOT1 N-TERMINAL DOMAIN IN COMPLEX WITH TBP AND NC2 BOUND TO A PROMOTER DNA FRAGMENT
reference	Hopfner et al. Elife 4 ? 2015
source	ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1) / ENCEPHALITOZOON CUNICULI (STRAIN GB-M1)
experiment	X-ray (resolution=3.78, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4wzs_A interface= pisrlkrimqlnedigkigasvpvvaskaiemflteivgltlkeasefiiratesdpkfaflknme > 4wzs_B interface= lpkatvdkmvsssvvpkeskeifqnaciyflnmltleankaceeekkktisyehvykalknlgfesyvescmkehenyesyikqkdsgltmeelhsqqiklfqnaklqfersf > 4wzs_D interface=9,11,39,54,56,62,64,99,101,130,131,145,147,153,155, sgiiptlqNvVatvnlsckldlknialrarnaeynpkrFaavimrirepkttaLiFasgkmViTgaksekssrmaaqryakiihklgfnatfddfkiqNiVsscdikfsirleglayahsnycsyepelFPgliyrmvkpkivlLiFvsgkiVlTgakvrddiyqafnniypvliqhr
interface signature	//NVFLFVTNVFPLFVT

Estimated binding specificities ?

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# IC=8.912 IC/col=0.990 n_of_columns=9

specificity:

A |   9   0   7   0   0  73   0  96   9
C |  73   0   9   0   0   7   0   0   7
G |   7   0   7   0   0   9   0   0  73
T |   7  96  73  96  96   7  96   0   7

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updated Fri Dec 13 21:44:33 2024