interface graph thumbnail
legend  pdf

structure nameANTPHD WITH 15BP DNA DUPLEX
(Homeotic protein antennapedia)
referenceZandarashvili et al. Biophys.J. 109 1026 2015
sourceDrosophila melanogaster
experimentX-ray (resolution=2.70, R-factor=0.229)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKIQNM

Estimated binding specificities ?

readout + contactlogo
# IC=6.338 IC/col=0.905 n_of_columns=7 specificity:   
A |   0   7  73  96   7   7   0
C |  96   7   7   0   7   7   0
G |   0   9   9   0   7  75  96
T |   0  73   7   0  75   7   0
scan!

home
updated Tue Dec 17 00:26:47 2024