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structure nameANTPHD WITH 15BP DNA DUPLEX
(Homeotic protein antennapedia)
referenceZandarashvili et al. Biophys.J. 109 1026 2015
sourceDrosophila melanogaster
experimentX-ray (resolution=2.70, R-factor=0.229)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
reference complex5jlw_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKIQNM

Estimated binding specificities ?

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# IC=6.055 IC/col=0.865 n_of_columns=7 specificity:   
A |   6   5  65   0   5  80   0
C |  80  80   6   0   5   5   0
G |   5   5  15   0   5   5  96
T |   5   6  10  96  81   6   0
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updated Sat Aug 2 07:26:42 2025