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structure nameANTPHD WITH 15BP DNA DUPLEX
(Homeotic protein antennapedia)
referenceZandarashvili et al. Biophys.J. 109 1026 2015
sourceDrosophila melanogaster
experimentX-ray (resolution=2.70, R-factor=0.229)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
reference complex5jlw_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRKIQNM

Estimated binding specificities ?

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# IC=6.161 IC/col=0.880 n_of_columns=7 specificity:   
A |   6   6  72   0   6  78   0
C |  78  84   6   0   6   6   0
G |   6   6  12   0   6   6  96
T |   6   0   6  96  78   6   0
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updated Thu Sep 12 20:13:26 2024