4yg7_BCDEGK : 3D-footprint complex

structure name	STRUCTURE OF FL AUTOREPRESSION PROMOTER COMPLEX
reference	Nature 524 59 2015 X-RAY DIFFRACTION
source	ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12)
experiment	X-ray (resolution=3.77, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4yg7_B interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd > 4yg7_C interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4yg7_D interface= pklvtwmnnqrvgeltklangahtfKyapewlasRYArpLslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykadfrisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey > 4yg7_E interface=35,36,40, fqkiysptqlanamklvrqqngwtqselakkigiKQatiSnfennpdnttlttffkilqslelsmtlcd > 4yg7_G interface=25,26,35,36,37,40, fqkiysptqlanamklvrqqngwtQSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4yg7_K interface= pklvtwmnnqrvgeltklangahtFKyapewlasRYArpLslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykarisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey
interface signature	SKQAS/SKQAS/KRYAL/KQS/QSKQAS/FKRYAL

Estimated binding specificities ?

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# IC=19.998 IC/col=0.488 n_of_columns=41

specificity:

A |  76   0   0   0   0  24  24  24  24  24   7   0  24  24   1  87  24  24  24  24  24  24  24  24  24  24   0  96   1   0  17  24  24  24  24  24   1   4  24   0  96
C |   8   1  96  96  96  24  24  24  24  24   9   0  24  24   1   1  24  24  24  24  24  24  24  24  24  24   0   0   1  94  48  24  24  24  24  24   4   1  24   0   0
G |   7   0   0   0   0  24  24  24  24  24  73  96  24  24   1   7  24  24  24  24  24  24  24  24  24  24   0   0   1   1  15  24  24  24  24  24  90  90  24   0   0
T |   5  95   0   0   0  24  24  24  24  24   7   0  24  24  93   1  24  24  24  24  24  24  24  24  24  24  96   0  93   1  16  24  24  24  24  24   1   1  24  96   0

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updated Fri Dec 13 22:27:14 2024