4yg7_BCDEGK : 3D-footprint complex

structure name	STRUCTURE OF FL AUTOREPRESSION PROMOTER COMPLEX
reference	Nature 524 59 2015 X-RAY DIFFRACTION
source	ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12)
experiment	X-ray (resolution=3.77, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4z5h_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4yg7_B interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcd > 4yg7_C interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4yg7_D interface= pklvtwmnnqrvgeltklangahtfKyapewlasRYArpLslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykadfrisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey > 4yg7_E interface=35,36,40, fqkiysptqlanamklvrqqngwtqselakkigiKQatiSnfennpdnttlttffkilqslelsmtlcd > 4yg7_G interface=25,26,35,36,37,40, fqkiysptqlanamklvrqqngwtQSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4yg7_K interface= pklvtwmnnqrvgeltklangahtFKyapewlasRYArpLslslplqrgnitsdavfnffdnllpdspivrdrivkryhaksrqpfdllseigrdsvgavtlipedetvthpimawekltearleevltaykarisvagaqektallrigndwcipkgitptthiiklpilsqsvdneyyclllakelglnvpdaeiikagnvralaverfdrrwnaertvllrlpqedmcqtfglpssvkyesdggpgiarimaflmgssealkdrydfmkfqvfqwligatqghaknfsvfiqaggsyrltpfydiisafpvlggtgihisdlklamglnaskgkktaidkiyprhflatakvlrfpevqmheilsdfarmipaaldnvktslptdfpenvvtavesnvlrlhgrlsrey
interface signature	SKQAS/SKQAS/KRYAL/KQS/QSKQAS/FKRYAL

Estimated binding specificities ?

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# IC=19.605 IC/col=0.478 n_of_columns=41

specificity:

A |  80   0   0   0   0  24  24  24  24  24   7   0  24  24   4  80  24  24  24  24  24  24  24  24  24  24   0  96   4   0  15  24  24  24  24  24   1   1  24   0  96
C |   1   1  96  96  96  24  24  24  24  24  11   0  24  24   1   8  24  24  24  24  24  24  24  24  24  24   0   0   1  94  48  24  24  24  24  24   4   1  24   0   0
G |   7   1   0   0   0  24  24  24  24  24  71  96  24  24   1   7  24  24  24  24  24  24  24  24  24  24   0   0   1   1  17  24  24  24  24  24  90  90  24   0   0
T |   8  94   0   0   0  24  24  24  24  24   7   0  24  24  90   1  24  24  24  24  24  24  24  24  24  24  96   0  90   1  16  24  24  24  24  24   1   4  24  96   0

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updated Wed Jul 30 03:55:26 2025