interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF RAD4-RAD23 CROSSLINKED TO AN UNDAMAGED DNA
referenceMin et al. 'Nat 6 5849 2015
experimentX-ray (resolution=3.05, R-factor=0.197)
structural superfamilyCysteine proteinases;
sequence familyRad4 transglutaminaselike domain; Rad4 betahairpin domain 3; Rad4 betahairpin domain 1; Rad4 betahairpin domain 2;
reference complex2qsh_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRRMNFNEVFFETKP

Estimated binding specificities ?

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# IC=4.880 IC/col=0.488 n_of_columns=10 specificity:   
A |   6   0   0   0  24  24  24  24  22  14
C |  78   0   0   0  24  24  24  24  22  52
G |   6  96  96  96  24  24  24  24  22  16
T |   6   0   0   0  24  24  24  24  30  14
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updated Fri Jan 9 02:00:31 2026