4z5c_AB : 3D-footprint complex

structure name	HIPB-O3 21MER COMPLEX
reference	Schumacher et al. 'To ? ? ?
source	Escherichia coli
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4z5h_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4z5c_A interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4z5c_B interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak
interface signature	SKQAS/SKQAS

Estimated binding specificities ?

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# IC=12.910 IC/col=0.717 n_of_columns=18

specificity:

A |   9  96   0   0   0   7  24  24  24  24  24  24   7   0   0  96   0  73
C |   7   0   0  96  96   9  24  24  24  24  24  24   7   0   0   0   0   7
G |   7   0   0   0   0  73  24  24  24  24  24  24  73  96  96   0   0   9
T |  73   0  96   0   0   7  24  24  24  24  24  24   9   0   0   0  96   7

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updated Tue Sep 10 01:14:10 2024