4z5d_AB : 3D-footprint complex

structure name	HIPB-O4 21MER COMPLEX
reference	Schumacher et al. 'To ? ? ?
source	Escherichia coli
experiment	X-ray (resolution=2.15, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;
reference complex	4z5h_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4z5d_A interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4z5d_B interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak
interface signature	SKQAS/SKQAS

Estimated binding specificities ?

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# IC=11.855 IC/col=0.659 n_of_columns=18

specificity:

A |   3  96  12   0   0   6  24  24  24  24  24  24  15   0   0  72   0  84
C |   0   0  18  96  96   3  24  24  24  24  24  24  51   0   0   3   0   3
G |   0   0   9   0   0  81  24  24  24  24  24  24  18  96  96  12   0   3
T |  93   0  57   0   0   6  24  24  24  24  24  24  12   0   0   9  96   6

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updated Wed Jul 30 04:36:18 2025