4z5d_AB : 3D-footprint complex

structure name	HIPB-O4 21MER COMPLEX
reference	Schumacher et al. 'To ? ? ?
source	Escherichia coli
experiment	X-ray (resolution=2.15, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 4z5d_A interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak > 4z5d_B interface=26,35,36,37,40, fqkiysptqlanamklvrqqngwtqSelakkigiKQAtiSnfennpdnttlttffkilqslelsmtlcdak
interface signature	SKQAS/SKQAS

Estimated binding specificities ?

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# IC=11.293 IC/col=0.627 n_of_columns=18

specificity:

A |   2  96  15   0   0  20  24  24  24  24  24  24   2   0   0  54   0  93
C |   2   0  15  96  96  10  24  24  24  24  24  24  72   0   0  12   0   0
G |   7   0  15   0   0  51  24  24  24  24  24  24   7  96  96  12   0   3
T |  85   0  51   0   0  15  24  24  24  24  24  24  15   0   0  18  96   0

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updated Fri Dec 13 23:09:05 2024