5cc0_AB : 3D-footprint complex

structure name	ANCSR2 - TSLP NGRE COMPLEX
reference	Ortlund et al. Proc.Natl.Acad.Sci.USA 113 326 2016
source	synthetic construct
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	5cbz_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5cc0_A interface=25,26,30, qkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlga > 5cc0_B interface=25,26,30, qkvclicgdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacrlrkclqagmtlg
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=4.117 IC/col=0.317 n_of_columns=13

specificity:

A |  21  21  24  24   0  24  24  24  24  24  24   0   0
C |  21  42  24  24  96  24  24  24  24  24  24  96   0
G |  21  12  24  24   0  24  24  24  24  24  24   0  96
T |  33  21  24  24   0  24  24  24  24  24  24   0   0

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updated Sat Dec 14 00:57:42 2024