5d4s_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF ARAR(DBD) IN COMPLEX WITH OPERATOR ORX1
reference	Narayanan et al. J.Biol.Chem. 291 1235 2016
source	Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168) / Bacillus subtilis (strain 168)
experiment	X-ray (resolution=1.97, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5d4s_A interface=32,42,44,47,63, efmlpkyaqvkeeisswinqgkilpdqkiptEnelmqqfgvSrHtiRkaigdlvsqgllysvQgggtfva > 5d4s_B interface=45,46,55,56,57,60,76, hhhlevlfqgplsefmlpkyaqvkeeisswinqgkilpdqkiptENelmqqfgvSRHtiRkaigdlvsqgllysvQgggtfva
interface signature	ESHRQ/ENSRHRQ

Estimated binding specificities ?

readout + contact

# IC=7.948 IC/col=0.795 n_of_columns=10

specificity:

A |   0   0   3  24   0   0   2  50  15   2
C |  18   0  28  24  96   0   3  17  26   2
G |   0  96   2  24   0  96   2  13   2  89
T |  78   0  63  24   0   0  89  16  53   3

scan!

home
updated Sat Dec 14 01:26:19 2024