5dtd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
reference	Hancock et al. 'Plos 11 e0150189 2016
source	Escherichia coli
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5dtd_A interface=77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn > 5dtd_B interface=84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn
interface signature	NRTR/NRR

Estimated binding specificities ?

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# IC=8.586 IC/col=0.505 n_of_columns=17

specificity:

A |   4   0   0  24  24  14  24  24  24  24  24   3   3  24  24   0   0
C |  92   0   0  24  24  17  24  24  24  24  24   0  69  24  21  96   0
G |   0  96   0  24  24  51  24  24  24  24  24   0  24  24  34   0  96
T |   0   0  96  24  24  14  24  24  24  24  24  93   0  24  17   0   0

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updated Thu Jun 25 03:23:50 2026