5dtd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
reference	Hancock et al. 'Plos 11 e0150189 2016
source	Escherichia coli
experiment	X-ray (resolution=2.64, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5dtd_A interface=77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn > 5dtd_B interface=84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn
interface signature	NRTR/NRR

Estimated binding specificities ?

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# IC=8.386 IC/col=0.493 n_of_columns=17

specificity:

A |   0   0   0  24  24   8  24  24  24  24  24   4   4  24  23   0   4
C |  91   0   4  24  24   0  24  24  24  24  24   0  75  24  26  96  13
G |   4  96   0  24  24  74  24  24  24  24  24   0  13  24  43   0  78
T |   1   0  92  24  24  14  24  24  24  24  24  92   4  24   4   0   1

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updated Sat Dec 14 01:38:48 2024