5dtd_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F1-8C (AAATTCGTTTGAATTTTGAGCGAATTT)
reference	Hancock et al. 'Plos 11 e0150189 2016
source	Escherichia coli
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5dtd_A interface=77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgTlRkklkkygmn > 5dtd_B interface=84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqtraalmmgiNRgtlRkklkkygmn
interface signature	NRTR/NRR

Estimated binding specificities ?

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# IC=8.066 IC/col=0.474 n_of_columns=17

specificity:

A |   3   0  17  24   2  84  24  24  24  24  24   9  24  24  84   0   3
C |  88   0  61  24   3   3  24  24  24  24  24  69  24  24   3  96   6
G |   5  96  11  24  88   3  24  24  24  24  24  11  24  24   3   0  84
T |   0   0   7  24   3   6  24  24  24  24  24   7  24  24   6   0   3

scan!

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updated Mon Jan 5 15:57:20 2026