interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F35 (AAATTAGTTTGAATCTCGAGCTAATTT)
referenceHancock et al. 'Plos 11 e0150189 2016
sourceEscherichia coli
experimentX-ray (resolution=2.89, R-factor=?)
structural superfamilyHomeodomain-like;
reference complex5ds9_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRK/NRR

Estimated binding specificities ?

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# IC=9.722 IC/col=0.572 n_of_columns=17 specificity:   
A |  84   0   6  24   3   3  24  24  24  24  24   3   6  24   3   0   6
C |   3   0   3  24   3   3  24  24  24  24  24  87   3  24   3  96   3
G |   3  96   3  24   3  84  24  24  24  24  24   3  84  24  84   0   3
T |   6   0  84  24  87   6  24  24  24  24  24   3   3  24   6   0  84
scan!

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updated Tue Sep 10 03:39:21 2024