5e3o_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27BP DNA F32 (AAATTTGGAGGAATTTTCTCCAAATTT)
reference	Hancock et al. 'Plos 11 e0150189 2016
source	Escherichia coli
experiment	X-ray (resolution=2.78, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5e3o_A interface=68,77,78,80,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgTlRkklkkygmn > 5e3o_B interface=75,84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn
interface signature	TNRTR/TNRR

Estimated binding specificities ?

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# IC=9.969 IC/col=0.586 n_of_columns=17

specificity:

A |   0   0   5  24   5   0  24  24  24  24  24   5  16  24   5   0  96
C |   0   0   6  24  10   0  24  24  24  24  24   6  55  24  85  96   0
G |   0  96  80  24  70  96  24  24  24  24  24   0  10  24   5   0   0
T |  96   0   5  24  11   0  24  24  24  24  24  85  15  24   1   0   0

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updated Thu Jun 25 03:30:21 2026