interface graph thumbnail
legend  pdf

structure nameGLUCOCORTICOID RECEPTOR DNA BINDING DOMAIN - IL8 NF-KB RESPONSE ELEMENT COMPLEX
referenceOrtlund et al. 'Nat 9 1337 2018
sourceHomo sapiens
experimentX-ray (resolution=1.85, R-factor=?)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
reference complex5e69_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVR/VR

Estimated binding specificities ?

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# IC=5.157 IC/col=0.516 n_of_columns=10 specificity:   
A |   0   5  24  24  24  96  96  25  24   6
C |  96  26  24  24  24   0   0  21  24   0
G |   0  45  24  24  24   0   0  15  24   5
T |   0  20  24  24  24   0   0  35  24  85
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updated Wed Jul 30 07:15:03 2025