5ed4_AB : 3D-footprint complex

structure name	STRUCTURE OF A PHOP-DNA COMPLEX
reference	'Sci 6 24442 2016
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5ed4_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ed4_A interface=187,188,190,191,192,194,195,212, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrrkidtgekrllhtlRgvgyvlrepr > 5ed4_B interface=182,185,186,187,189,190,207, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltarkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrrkidtgekrllhtlRgvgyvlrepr
interface signature	NVESYSYR/NESYSYR

Estimated binding specificities ?

readout + contact

# IC=9.853 IC/col=0.616 n_of_columns=16

specificity:

A |   5   0   0  24   3  69  24  24  24  59  11   0   0   0  24  55
C |  82   0   0  24   0   7  24  24  24   3  13  48   0   0  24   0
G |   3   0  96  24  92  13  24  24  24   1  61   2   0  96  24  40
T |   6  96   0  24   1   7  24  24  24  33  11  46  96   0  24   1

scan!

home
updated Mon Jan 5 16:09:41 2026