5ed4_AB : 3D-footprint complex

structure name	STRUCTURE OF A PHOP-DNA COMPLEX
reference	'Sci 6 24442 2016
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=2.40, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ed4_A interface=187,188,190,191,192,194,195,212, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrrkidtgekrllhtlRgvgyvlrepr > 5ed4_B interface=182,185,186,187,189,190,207, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltarkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrrkidtgekrllhtlRgvgyvlrepr
interface signature	NVESYSYR/NESYSYR

Estimated binding specificities ?

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# IC=9.604 IC/col=0.600 n_of_columns=16

specificity:

A |   1   0   0  24   4  65  24  24  24  48  11   5   0   0  24  49
C |  88   0   0  24   0   5  24  24  24   5   9  38   0   0  24   0
G |   4   0  96  24  92  11  24  24  24   9  61   3   0  96  24  47
T |   3  96   0  24   0  15  24  24  24  34  15  50  96   0  24   0

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updated Sat Dec 14 01:49:37 2024