5ed4_AB : 3D-footprint complex

structure name	STRUCTURE OF A PHOP-DNA COMPLEX
reference	'Sci 6 24442 2016
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5ed4_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ed4_A interface=187,188,190,191,192,194,195,212, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrrkidtgekrllhtlRgvgyvlrepr > 5ed4_B interface=182,185,186,187,189,190,207, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltarkiagltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrrkidtgekrllhtlRgvgyvlrepr
interface signature	NVESYSYR/NESYSYR

Estimated binding specificities ?

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# IC=9.695 IC/col=0.606 n_of_columns=16

specificity:

A |   0  24   0  96  46  17  34  24  24  24  11   0  24   0  96   3
C |  44  24  96   0   5  55   3  24  24  24   7  94  24  96   0   4
G |   0  24   0   0  44  13  15  24  24  24   7   1  24   0   0  88
T |  52  24   0   0   1  11  44  24  24  24  71   1  24   0   0   1

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updated Tue Sep 10 03:44:18 2024