5ed4_EF : 3D-footprint complex

structure name	STRUCTURE OF A PHOP-DNA COMPLEX
reference	'Sci 6 24442 2016
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5ed4_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ed4_E interface=189,190,192,193,194,196,197,200,214, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragrnvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrRkidtgekrllhtlRgvgyvlrepr > 5ed4_F interface=179,182,183,184,186,187,190,204, pearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltaragltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrRkidtgekrllhtlRgvgyvlrepr
interface signature	NVESYSYRR/NESYSYRR

Estimated binding specificities ?

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# IC=11.283 IC/col=0.664 n_of_columns=17

specificity:

A |   7   0  64   0  96   3  24  24  24  24  24   7   1  67   0  96   7
C |   8  89  14  96   0   1  24  24  24  24  24  11  92   7  96   0   7
G |  10   0  10   0   0  92  24  24  24  24  24   7   0  14   0   0  78
T |  71   7   8   0   0   0  24  24  24  24  24  71   3   8   0   0   4

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updated Mon Jan 5 16:10:09 2026