5ed4_EF : 3D-footprint complex

structure name	STRUCTURE OF A PHOP-DNA COMPLEX
reference	'Sci 6 24442 2016
source	Mycobacterium tuberculosis
experiment	X-ray (resolution=2.40, R-factor=?)
structural superfamily	CheY-like;C-terminal effector domain of the bipartite response regulators;
reference complex	5ed4_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ed4_E interface=189,190,192,193,194,196,197,200,214, tpearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltardslqdkiagltlggddyvtkpfsleevvarlrvilrragrnvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNVvESYvSYlrRkidtgekrllhtlRgvgyvlrepr > 5ed4_F interface=179,182,183,184,186,187,190,204, pearvlvvddeanivellsvslkfqgfevytatngaqaldraretrpdavildvmmpgmdgfgvlrrlradgidapalfltaragltlggddyvtkpfsleevvarlrvilrragvrltfadieldeethevwkagqpvslspteftllryfvinagtvlskpkildhvwrydfggdvNvvESYvSYlrRkidtgekrllhtlRgvgyvlrepr
interface signature	NVESYSYRR/NESYSYRR

Estimated binding specificities ?

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# IC=9.577 IC/col=0.599 n_of_columns=16

specificity:

A |  10   0   0  10   5  54  24  24  24  24  24   0   0   0  24  11
C |  60   0   0  18   0  10  24  24  24  24  24  96   0   0  24   0
G |  16   0  96  10  90  16  24  24  24  24  24   0   0  96  24  85
T |  10  96   0  58   1  16  24  24  24  24  24   0  96   0  24   0

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updated Tue Sep 10 03:44:36 2024