5ejk_CE : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ROUS SARCOMA VIRUS INTASOME
reference	Banerjee et al. Nature 530 362 2016
source	ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C) / ROUS SARCOMA VIRUS (STRAIN PRAGUE C)
experiment	X-ray (resolution=3.80, R-factor=?)
structural superfamily	Ribonuclease H-like;DNA-binding domain of retroviral integrase;N-terminal Zn binding domain of HIV integrase;
reference complex	7jn3_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5ejk_C interface=250, plreakdlhtalhigpralskasnismqqarevvqtcphcglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqamveranrmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergentktpiqkhwrptvltegppvkirietgewekgwnvlvwgrgyaavknrdtdkviwvpsRkvkpdi > 5ejk_E interface=154,157,158,161,203,244, plreakdlhtalhigpralskasnismqqarevvqtcphcnsapaleagvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiavmgrpkaiktdngscftskstrewmarwgiahttgipgnsqgqAmvERanRmmkdkirvlaegdgfmkriptskqgemmakamyalnhfergEntktpiqkhwrptvltegppvkirietgewekgwnvlvwgRgyaavknrdtdkviwvpsrkvkpdi
interface signature	R/AERRER

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# IC=4.007 IC/col=0.801 n_of_columns=5

A |  96   9  96  67   9
C |   0  69   0   9  67
G |   0   9   0   9  11
T |   0   9   0  11   9

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updated Wed Jul 30 07:16:34 2025