interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS (PFV) INTASOME IN COMPLEX WITH MAGNESIUM AND THE INSTI XZ419 (COMPOUND 4C)
(INTEGRASE)
referenceCherepanov et al. 'Acs 11 1074 2016
sourceHUMAN SPUMARETROVIRUS
experimentX-ray (resolution=2.85, R-factor=0.179)
structural superfamilyRibonuclease H-like;
sequence familyIntegrase core domain;
reference complex3oym_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureIRQERP

Estimated binding specificities ?

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# IC=2.416 IC/col=0.604 n_of_columns=4 specificity:   
A |   0  10  11  49
C |   0   8  67  15
G |  96   8   9  15
T |   0  70   9  17
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updated Thu Sep 12 21:16:40 2024