interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX
referenceLian et al. 'Cell 19 1334 2017
sourceArabidopsis thaliana
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex5gnj_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHERR/HERR

Estimated binding specificities ?

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# IC=8.004 IC/col=1.001 n_of_columns=8 specificity:   
A |   0  96   0   9   0   0  11  67
C |  96   0  96   9   0   0   9  11
G |   0   0   0  69   0  96   9   9
T |   0   0   0   9  96   0  67   9
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updated Wed Jul 30 07:47:26 2025