interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX
referenceLian et al. 'Cell 19 1334 2017
sourceArabidopsis thaliana
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex5gnj_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHERR/HERR

Estimated binding specificities ?

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# IC=8.121 IC/col=1.015 n_of_columns=8 specificity:   
A |  10  64   0  96  12   0   0   0
C |  10  10  96   0  74   0   0   0
G |  10  10   0   0   0  96   0  96
T |  66  12   0   0  10   0  96   0
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updated Tue Sep 10 04:14:21 2024