interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX
referenceLian et al. 'Cell 19 1334 2017
sourceArabidopsis thaliana
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex5gnj_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHERR/HERR/ARKL

Estimated binding specificities ?

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# IC=3.781 IC/col=0.540 n_of_columns=7 specificity:   
A |  38   1  60   8   6  12   3
C |  19  83  12  65   4  10   2
G |  19   3  12  19  80  14  90
T |  20   9  12   4   6  60   1
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updated Wed Jul 30 07:47:32 2025