interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A TRANSCRIPTION FACTOR AND DNA COMPLEX
referenceLian et al. 'Cell 19 1334 2017
sourceArabidopsis thaliana
experimentX-ray (resolution=2.70, R-factor=?)
structural superfamilyHLH, helix-loop-helix DNA-binding domain;
reference complex5gnj_I
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHERR/HERR/ARKL

Estimated binding specificities ?

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# IC=3.924 IC/col=0.561 n_of_columns=7 specificity:   
A |   1  59   4   3  13   8  19
C |  90  13  80  18   9   1  20
G |   3   8   4  66  13  86  19
T |   2  16   8   9  61   1  38
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updated Tue Sep 10 04:14:29 2024